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CELLEDIT CRISPR CELL LINE ENGINEERING

CRISPR Knock-in Through Direct Nuclear Delivery

Generate precise knock-in cell lines with controlled insertions, preserved cell health, and sequence-validated clones.

CellEDIT delivers CRISPR-Cas9 and HDR donor template directly into individual nuclei, for controlled insertions, reduced delivery variability and preserved cell health.

Precise knock-in design

Insert reporters, tags, point mutations, or donor sequences at the target locus with an editing strategy tailored to your assay and cell model.

Direct nuclear delivery

Deliver CRISPR reagents and donor DNA directly into single cell nuclei to improve consistency, reduce toxicity, and support efficient HDR.

Validated clone output

Receive sequence verified knock in clones with monoclonality evidence, quality control data, and clear project documentation for downstream use.

Research Applications

The Knock-ins for discovery and development

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Single nucleotide variants (SNVs)

To support your target validation &disease modeling, recreate exact patient-specific clinical mutations in vitro.

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Protein modification

Alter specific protein domains without disrupting gene architecture to understand mechanism of action early in development.

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Endogenous tagging

Insert tags (GFP, HiBiT) into native gene loci to unsure the quality of your physiological screening. Avoid over-expression artifacts during high-throughput screening and real-time targeted protein degradation tracking.

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Gene integration

Safely insert large DNA payloads to engineer advanced cell therapies or build complex, highly stable reporter cell lines.

FluidFM Technology

Direct nuclear delivery for precise knock-ins

FluidFM delivers defined amounts of CRISPR RNPs and donor DNA directly into individual cell nuclei, giving you greater control over knock-in conditions.

By avoiding bulk transfection, the workflow helps reduce delivery variability, preserve cell health, and support more consistent editing outcomes.

Explore FluidFM Technology

Uncompromised cell integrity

Unlike harsh electroporation, only FluidFM preserves the native physiological and morphological state of your cells.

Maximized editing specificity

Precisely controlled reagent concentrations prevent the over-dosing seen in bulk delivery, reducing off-target effects.

Stoiciometric delivery

Exact, controlled injection of RNPs and donor templates into every single cell.

Uncompromised data integrity

A trusted partner delivering biologically accurate models you can rely on for your downstream assays.

CellEDIT Workflow

From Design to Delivery

CellEDIT Workflow


From project design to validated clone delivery, our team manages the complete knock-in workflow with clear milestones and expert support throughout.

Discuss Your Knock-in Project

Consultation

Project feasibility and CRISPR design strategy

Cell Pickup

Cell Packaging & Collection

CRISPR Design

Development of an editing strategy

CRISPR Injection

FluidFM delivery of CRIPR RNPs into single cells

Clonal Outgrowth

Single cell seeding and monoclonal outgrowth

Screening

Genotypic screening of targeted edits

Quality Control

Monoclonality, viability, sterility, and mycoplasma testing

Shipment

Cryopreserved clones and project report delivery

Project Deliverables

Included in every knock-in project

Every CellEDIT Knock-In project includes the essential steps for design, editing, validation, and delivery of engineered cell lines.

Deliverable Included On Demand
Editing strategy design from CellEDIT experts
Clear project plan and regular updates
Full gRNA design report before workflow begins
Two edited clones & two Wild Type clones (1 cryovial per clone)
Full final report: sequencing results, monoclonality proof, mycoplasma testing
Full support with inbound and outbound cell shipment
Additional clones
Off-target analysis & report

Extended quality control (e.g. NGS, WGS, target copy number)

Additional information for further analysis or publication

Cell Lines

Your Cells & Edits. Our Expertise.


Browse our custom cell lines: from hard-to-transfect to breast cancer cells, explore our CRISPR-edited cell lines through intra-nuclear delivery.

FAQs

Knock-in editing FAQs


Find answers about CellEDIT Knock-in, compatible cell lines, validation, and project requirements.

Current knock-in capabilities support small insertions up to approximately 120 base pairs using ssODN donors with 60 nucleotide homology arms. This enables endogenous epitope tags like HA or FLAG, precise point mutations, and silent PAM-disrupting substitutions.

FluidFM delivers CRISPR RNP and donor templates directly into the nucleus, bypassing cytoplasmic degradation and ensuring immediate co-localization at the break site. Unlike electroporation's stochastic uptake, FluidFM provides metered dosing with consistent nuclear concentrations, reducing cytotoxicity while maximizing HDR engagement

Yes, the FluidFM-based CellEDIT service specializes in hard-to-transfect cells. The direct intra-nuclear delivery method overcomes traditional transfection barriers, making knock-in possible in previously challenging cell types.

Standard QC includes allele-specific PCR assays and Sanger sequencing to verify precise integration, viability assessment, and mycoplasma testing. Matched control clones undergo identical injection without editing. Optional off-target evaluation and monoclonality documentation are available on request.

A knock-in cell line has a specific gene or DNA sequence inserted at a targeted genomic location, while knockout removes or disrupts a gene. Knock-in allows controlled expression of new or modified genes at physiological levels.

Yes, multiplex editing capabilities allow combining single-gene knockouts with knock-ins when feasible. This enables disrupting negative regulators while installing reporter tags or creating null backgrounds with specific rescue mutations. Feasibility is case-dependent and assessed during initial consultation

FluidFM technology enables direct intra-nuclear delivery of CRISPR reagents, bypassing cellular barriers and delivering components directly to the nucleus. This approach enhances efficiency and reduces off-target effects, particularly in hard-to-transfect cells.

The CellEDIT service includes gRNA design, edited and wild-type clones, sequencing validation, and quality control. Customers receive custom monoclonal cell lines with validated insertions.

Knock-in cell lines are used for disease modeling, drug discovery, gene therapy research, synthetic biology applications, neuroscience studies, and agricultural biotechnology. They enable precise study of gene function under physiological conditions.

Yes, FluidFM intranuclear injection is particularly suitable for delicate and hard-to-transfect cell lines including primary cells and iPSCs. The gentle, vector-free delivery preserves viability where conventional electroporation or lipofection methods fail or cause excessive cytotoxicity.

We specialize in precise small knock-ins (≤ ~120 bp) like epitope tags (HA, FLAG) and precise point mutations using ssODN donors via HDR.

FluidFM injects RNPs and donors directly into the nucleus, ensuring immediate co-localization and bypassing cytoplasmic degradation for higher rates.

No, Cytosurge does not claim any IP rights on your cells or specific edits. You retain full ownership of your engineered cell lines.

Explore Other CellEDIT Editing Capabilities

Knockout

Complete gene disruption through frameshift mutations or full deletions.

Knockout

Ideal for loss-of-function studies, pathway analysis, and creating null backgrounds for rescue experiments.

Learn more about Knockouts

Multiplex Gene Editing

Edit multiple genetic targets in single cells with precise delivery.

Multiplex Gene Editing

Accelerate multiplex gene editing with FluidFM direct nuclear delivery.

Learn more about Multiplex Gene Editing

Ready to Start Your Knock-in Project

Discuss your Knockin project with our experts and receive a tailored project plan and quote